Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs112170749 chr12:116801911 C/G 0 286 26.37 21.17 4.07 KM Plot
KIRP rs11219215 chr11:123519652 C/T 0.000137 284 25.6 29.38 2.07 KM Plot
KIRP rs112237505 chr21:44283785 G/A 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs112243968 chr17:10220143 GC/G 3.8E-8 287 25.63 30.7 16.13 KM Plot
KIRP rs1122890 chr15:57596048 G/T 1.41E-6 288 25.7 23.63 7.28 KM Plot
KIRP rs112341208 chr10:43116000 C/A 6.87E-5 289 25.57 27.47 11.43 KM Plot
KIRP rs112347165 chr22:21245853 G/A 8.99E-7 277 25.23 34.98 17.48 KM Plot
KIRP rs112356035 chr7:52340304 C/CG 2.29E-6 283 26.37 20.9 13.1 KM Plot
KIRP rs112366106 chr21:44250691 C/T 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs112373714 chr21:44288594 C/T 0.000151 289 25.58 40.7 13.07 KM Plot
KIRP rs11237456 chr11:78040780 C/G 0.0002 287 26.2 25.97 21.23 KM Plot
KIRP rs112375848 chr22:40855011 A/G 8.51E-5 287 26.4 22.8 12.1 KM Plot
KIRP rs11238689 chr10:44249237 A/C 8.78E-12 289 24.73 30.9 8.6 KM Plot
KIRP rs11240354 chr1:205057482 A/T 2.32E-5 289 10.93 26.38 25.7 KM Plot
KIRP rs11240358 chr1:205070573 A/G 0.000204 289 25.25 28.07 21.28 KM Plot